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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 1.73 | 339 | 12_7_N_86_10_W |
| 2 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 1.49 | 67 | 20_29_N_88_54_W |
| 3 | A*68:01:02-B*40:02:01-C*03:05-DRB1*04:07-DQB1*03:02 | Costa Rica Central Valley Mestizo (G) | 1.36 | 221 | 9_55_N_84_5_W |
| 4 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*04:02 | Panama | 1.14 | 462 | 8_59_N_79_37_W |
| 5 | A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 6 | A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 7 | A*68:03-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02 | Mexico Chichen Itza Maya (prehispanic) | 1.06 | 47 | 20_40_N_88_34_W |
| 8 | A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 0.87 | 339 | 12_7_N_86_10_W |
| 9 | B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | Mexico Mexico City Mestizo pop 2 | 0.86 | 234 | 19_26_N_99_8_W |
| 10 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | Colombia Bogotá Cord Blood | 0.82 | 1,463 | 4_39_N_73_52_W |
| 11 | A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02 | Mexico Tixcacaltuyub Maya | 0.75 | 67 | 20_29_N_88_54_W |
| 12 | A*31:01:02-B*40:02:01-C*03:05-DRB1*04:07-DQB1*03:02 | Costa Rica Central Valley Mestizo (G) | 0.68 | 221 | 9_55_N_84_5_W |
| 13 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*04:01 | Panama | 0.38 | 462 | 8_59_N_79_37_W |
| 14 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*14:01 | Panama | 0.38 | 462 | 8_59_N_79_37_W |
| 15 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | USA NMDP Black South or Central American | 0.31 | 4,889 | 38_45_N_76_6_W |
| 16 | A*02:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 17 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:01 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 18 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 19 | A*31:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 20 | A*68:01-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPA1*01:03-DPB1*04:02 | Mexico Chiapas Lacandon Mayans | 0.23 | 218 | 16_54_N_92_5_W |
| 21 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*14:01 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 22 | A*31:02-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 23 | A*68:03-B*40:02-C*03:05-DRB1*04:07-DQA1*03:01-DQB1*03:02-DPB1*04:02 | Nicaragua Managua | 0.22 | 339 | 12_7_N_86_10_W |
| 24 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | USA NMDP Caribean Indian | 0.19 | 14,339 | 38_45_N_76_6_W |
| 25 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02-DPB1*105:01 | Panama | 0.19 | 462 | 8_59_N_79_37_W |
| 26 | A*68:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | Colombia Bogotá Cord Blood | 0.18 | 1,463 | 4_39_N_73_52_W |
| 27 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | USA NMDP American Indian South or Central America | 0.15 | 5,926 | 38_45_N_76_6_W |
| 28 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | USA Hispanic pop 2 | 0.14 | 1,999 | 44_58_N_93_15_W |
| 29 | A*31:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | USA Hispanic pop 2 | 0.14 | 1,999 | 44_58_N_93_15_W |
| 30 | A*02:22-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | Colombia Bogotá Cord Blood | 0.11 | 1,463 | 4_39_N_73_52_W |
| 31 | A*02:05-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 32 | A*68:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | USA Hispanic pop 2 | 0.05 | 1,999 | 44_58_N_93_15_W |
| 33 | A*24:02-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 34 | A*31:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 35 | A*02:11-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 36 | A*02:13-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
| 37 | A*30:01-B*40:02-C*03:05-DRB1*04:07-DQB1*03:02 | Colombia Bogotá Cord Blood | 0.03 | 1,463 | 4_39_N_73_52_W |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
support@allelefrequencies.net